University of Dundee

Plant Sciences 2010

Bos, J. I. B., Armstrong, M. R., Gilroy, E. M., Boevink, P. C., Hein, I., Taylor, R. M., Tian, Z. D., Engelhardt, S., Vetukuri, R. R., Harrower, B., Dixelius, C., Bryan, G., Sadanandom, A., Whisson, S. C., Kamoun, S. and Birch, P. R. J. (2010) Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences of the United States of America, 107, 9909-9914.

Clark, E. L., Karley, A. J. and Hubbard, S. F. (2010) Insect endosymbionts: manipulators of insect herbivore trophic interactions? Protoplasma, 244, 25-51.

De Maayer, P., Chan, W. Y., Venter, S. N., Toth, I. K., Birch, P. R. J., Joubert, F. and Coutinho, T. A. (2010) Genome Sequence of Pantoea ananatis LMG20103, the Causative Agent of Eucalyptus Blight and Dieback. Journal of Bacteriology, 192, 2936-2937.

Gomez, L. D., Whitehead, C., Barakate, A., Halpin, C. and McQueen-Mason, S. J. (2010) Automated saccharification assay for determination of digestibility in plant materials. Biotechnology for Biofuels, 3.

Grouffaud, S., Whisson, S. C., Birch, P. R. J. and Van West, P. (2010) Towards an understanding on how RxLR-effector proteins are translocated from oomycetes into host cells. Fungal Biology Reviews, 24, 27-36.

Hornyik, C., Duc, C., Rataj, K., Terzi, L. C. and Simpson, G. G. (2010) Alternative polyadenylation of antisense RNAs and flowering time control. Biochemical Society Transactions, 38, 1077-1081.

Hornyik, C., Terzi, L. C. and Simpson, G. G. (2010) The Spen Family Protein FPA Controls Alternative Cleavage and Polyadenylation of RNA. Developmental Cell, 18, 203-213.

Jing, R. C., Vershinin, A., Grzebyta, J., Shaw, P., Smykal, P., Marshall, D., Ambrose, M. J., Ellis, T. H. N. and Flavell, A. J. (2010) The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis. Bmc Evolutionary Biology, 10.

Johnson, S. N., Hallett, P. D., Gillespie, T. L. and Halpin, C. (2010) Below-ground herbivory and root toughness: a potential model system using lignin-modified tobacco. Physiological Entomology, 35, 186-191.

Kim, S. H., Spensley, M., Choi, S. K., Calixto, C. P. G., Pendle, A. F., Koroleva, O., Shaw, P. J. and Brown, J. W. S. (2010) Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research, 38, 3054-3067.

Lin, K., Husmeier, D., Dondelinger, F., Mayer, C. D., Liu, H., Prichard, L., Salmond, G. P. C., Toth, I. K. and Birch, P. R. J. (2010) Reverse Engineering Gene Regulatory Networks Related to Quorum Sensing in the Plant Pathogen Pectobacterium atrosepticum. Computational Biology, 253-281.

Milne, I., Shaw, P., Stephen, G., Bayer, M., Cardle, L., Thomas, W. T. B., Flavell, A. J. and Marshall, D. (2010) Flapjack-graphical genotype visualization. Bioinformatics, 26, 3133-3134.

Mitchell, C., Johnson, S. N., Gordon, S. C., Birch, A. N. E. and Hubbard, S. F. (2010) Combining plant resistance and a natural enemy to control Amphorophora idaei. BioControl (Dordrecht), 55.

Moragues, M., Comadran, J., Waugh, R., Milne, I., Flavell, A. J. and Russell, J. R. (2010) Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theoretical and Applied Genetics, 120, 1525-1534.

Preedy, K. F., Schofield, P. G., Liu, S. J., Matzavinos, A., Chaplain, M. A. J. and Hubbard, S. F. (2010) Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology, 262, 441-451.

Raczynska, K. D., Simpson, C. G., Ciesiolka, A., Szewc, L., Lewandowska, D., McNicol, J., Szweykowska-Kulinska, Z., Brown, J. W. S. and Jarmolowski, A. (2010) Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana. Nucleic Acids Research, 38, 265-278.

Sanchez, S. E., Petrillo, E., Beckwith, E. J., Zhang, X., Rugnone, M. L., Hernando, C. E., Cuevas, J. C., Herz, M. A. G., Depetris-Chauvin, A., Simpson, C. G., Brown, J. W. S., Cerdan, P. D., Borevitz, J. O., Mas, P., Ceriani, M. F., Kornblihtt, A. R. and Yanovsky, M. J. (2010) A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature, 468, 112-+.

Simpson, C. G., Manthri, S., Raczynska, K. D., Kalyna, M., Lewandowska, D., Kusenda, B., Maronova, M., Szweykowska-Kulinska, Z., Jarmolowski, A., Barta, A. and Brown, J. W. S. (2010) Regulation of plant gene expression by alternative splicing. Biochemical Society Transactions, 38, 667-671.