University of Dundee

Molecular Microbiology 2018

Alder-Rangel, A, Bailão, AM, da Cunha, AF, Soares, CMA, Wang, C, Bonatto, D, Dadachova, E, Hakalehto, E, Eleutherio, ECA, Fernandes, ÉKK, Gadd, GM, Braus, GH, Braga, GUL, Goldman, GH, Malavazi, I, Hallsworth, JE, Takemoto, JY, Fuller, KK, Selbmann, L, Corrochano, LM, von Zeska Kress, MR, Bertolini, MC, Schmoll, M, Pedrini, N, Loera, O, Finlay, RD, Peralta, RM & Rangel, DEN 2018, 'The second International Symposium on Fungal Stress: ISFUS' Fungal Biology, vol. 122, no. 6, pp. 386-399. https://doi.org/10.1016/j.funbio.2017.10.011

An, S & Tang, J-L 2018, 'The Ax21 protein influences virulence and biofilm formation in the nosocomial pathogen Stenotrophomonas maltophilia' Archives of Microbiology, vol. 200, no. 1, pp. 183-187. https://doi.org/10.1007/s00203-017-1433-7

Beaton, SE, Evans, RM, Finney, AJ, Lamont, CM, Armstrong, FA, Sargent, F & Carr, SB 2018, 'The Structure of Hydrogenase-2 from Escherichia coli: Implications for H2  -Driven Proton Pumping' Biochemical Journal, vol. 475, no. 7, pp. 1353-1370. https://doi.org/10.1042/BCJ20180053

Ceci, A, Pinzari, F, Riccardi, C, Maggi, O, Pierro, L, Petrangeli Papini, M, Gadd, GM & Persiani, AM 2018, 'Metabolic synergies in the biotransformation of organic and metallic toxic compounds by a saprotrophic soil fungus' Applied Microbiology and Biotechnology, vol. 102, no. 2, pp. 1019-1033. https://doi.org/10.1007/s00253-017-8614-9

Dragoš, A, Kiesewalter, H, Martin, M, Hsu, CY, Hartmann, R, Wechsler, T, Eriksen, C, Brix, S, Drescher, K, Stanley-Wall, N, Kümmerli, R & Kovács, ÁT 2018, 'Division of Labor during Biofilm Matrix Production' Current Biology, vol. 28, no. 12, pp. 1903-1913.e5. https://doi.org/10.1016/j.cub.2018.04.046

Erskine, E, MacPhee, CE & Stanley-Wall, N 2018, 'Functional amyloid and other protein fibres in the biofilm matrix' Journal of Molecular Biology. https://doi.org/10.1016/j.jmb.2018.07.026

Erskine, E, Morris, RJ, Schor, M, Earl, C, Gillespie, RMC, Bromley, KM, Sukhodub, T, Clark, L, Fyfe, P, Serpell, LC, Stanley-Wall, N & MacPhee, CE 2018, 'Formation of functional, non-amyloidogenic fibres by recombinant Bacillus subtilis TasA' Molecular Microbiology, vol. 110, no. 6, pp. 897-913. https://doi.org/10.1111/mmi.13985

Gadd, G 2018, 'Direct and indirect bioleaching of cobalt from low grade laterite and pyrite ores by Aspergillus niger' Microbial Biotechnology.

Guan, Z, Delago, A, Nußbaum, P, Meyer, BH, Albers, S-V & Eichler, J 2018, 'Gene deletions leading to a reduction in the number of cyclopentane rings in Sulfolobus acidocaldarius tetraether lipids' FEMS Microbiology Letters, vol. 365, no. 1, fnx250, pp. 1-8. https://doi.org/10.1093/femsle/fnx250

Harris, S, Piotrowska, MJ, Goldstone, RJ, Qi, R, Foster, G, Dobrindt, U, Madec, J-Y, Valat, C, Rao, FV & Smith, DGE 2018, 'Variant O89 O-Antigen of E. coli Is Associated With Group 1 Capsule Loci and Multidrug Resistance' Frontiers in Microbiology, vol. 9, no. AUG, 2026. https://doi.org/10.3389/fmicb.2018.02026

He, Z, Zhang, Q, Feng, Y, Luo, H, Pan, X & Gadd, GM 2018, 'Microbiological and environmental significance of metaldependent anaerobic oxidation of methane' Science of the Total Environment, vol. 610-611, pp. 759-768. https://doi.org/10.1016/j.scitotenv.2017.08.140

Jäger, F, Kneuper, H & Palmer, T 2018, 'EssC is a specificity determinant for Staphylococcus aureus type VII secretion' Microbiology, vol. 164, no. 5, 000650, pp. 816-820. https://doi.org/10.1099/mic.0.000650

Jeromson, S, Mackenzie, I, Doherty, MK, Whitfield, PD, Bell, G, Dick, J, Shaw, A, Rao, F, Ashcroft, S, Philp, A, Galloway, S, Gallagher, I & Hamilton, DL 2018, 'Lipid remodelling and an altered membrane proteome may drive the effects of EPA and DHA treatment on skeletal muscle glucose uptake and protein accretion' American Journal of Physiology, Endocrinology and Metabolism, vol. 314, 00438, pp. e605-e619. https://doi.org/10.1152/ajpendo.00438.2015

Joshi, N, Liu, F, Watts, MP, Williams, H, Coker, VS, Schmid, D, Hofmann, T & Lloyd, JR 2018, 'Optimising the transport properties and reactivity of microbially-synthesised magnetite for in situ remediation' Scientific Reports, vol. 8, 4246, pp. 1- 12. https://doi.org/10.1038/s41598-018-21733-y

Kalamara, M, Špacapan, M, Mandic‐Mulec, I & Stanley-Wall, N 2018, 'Social behaviours by Bacillus subtilis: quorum sensing, kin discrimination and beyond' Molecular Microbiology, vol. 110, no. 6, pp. 863-878. https://doi.org/10.1111/mmi.14127

Kang, X, Yu, X, Zhang, Y, Cui, Y, Tu, W, Wang, Q, Li, Y, Hu, L, Gu, Y, Zhao, K, Xiang, Q, Chen, Q, Ma, M, Zou, L, Zhang, X & Kang, J 2018, 'Inoculation of Sinorhizobium saheli YH1 Leads to Reduced Metal Uptake for Leucaena leucocephala Grown in Mine Tailings and Metal-Polluted Soils' Frontiers in Microbiology, vol. 9, 1853. https://doi.org/10.3389/fmicb.2018.01853

Mariano, G, Monlezun, L & Coulthurst, SJ 2018, 'Dual Role for DsbA in Attacking and Targeted Bacterial Cells during Type VI Secretion System-Mediated Competition' Cell Reports, vol. 22, no. 3, pp. 774-785. https://doi.org/10.1016/j.celrep.2017.12.075

McOwat, K & Stanley-Wall, NR 2018, 'Biofilm Building: A Simple Board Game to Reinforce Knowledge of Biofilm Formation' Journal of Microbiology & Biology Education, vol. 19, no. 1. https://doi.org/10.1128/jmbe.v19i1.1355

Ostrowski, A, Cianfanelli, FR, Porter, M, Mariano, G, Peltier, J, Wong, JJ, Swedlow, JR, Trost, M & Coulthurst, SJ 2018, 'Killing with proficiency: integrated post-translational regulation of an offensive Type VI secretion system' PLoS Pathogens, vol. 14, no. 7, e1007230, pp. 1-25. https://doi.org/10.1371/journal.ppat.1007230

Owen, RA, Fyfe, PK, Lodge, A, Biboy, J, Vollmer, W, Hunter, WN & Sargent, F 2018, 'Structure and activity of ChiX, a peptidoglycan hydrolase required for chitinase secretion by Serratia marcescens' Biochemical Journal, vol. 475, no. 2, pp. 415-428. https://doi.org/10.1042/BCJ20170633

Petrů, M, Wideman, J, Moore, K, Alcock, F, Palmer, T & Doležal, P 2018, 'Evolution of mitochondrial TAT translocases illustrates the loss of bacterial protein transport machines in mitochondria' BMC Biology, vol. 16, no. 1, 141, pp. 1-14. https://doi.org/10.1186/s12915-018-0607-3

Raimi, OG, Hurtado Guerrero, R & van Aalten, DMF 2018, 'Evidence for substrate assisted catalysis in Nacetylphosphoglucosamine mutase' The Biochemical journal, vol. 475, no. 15, pp. 2547-2557. https://doi.org/10.1042/BCJ20180172

Rangel, DEN, Finlay, RD, Hallsworth, JE, Dadachova, E & Gadd, GM 2018, 'Fungal strategies for dealing with environment- and agriculture-induced stresses' Fungal Biology, vol. 122, no. 6, pp. 602-612. https://doi.org/10.1016/j.funbio.2018.02.002

Rassam, P, Long, KR, Kaminska, R, Williams, DJ, Papadakos, G, Baumann, CG & Kleanthous, C 2018, 'Intermembrane crosstalk drives inner-membrane protein organization in Escherichia coli' Nature Communications, vol. 9, 1082, pp. 1-8. https://doi.org/10.1038/s41467-018-03521-4

Roger, M, Brown, F, Gabrielli, W & Sargent, F 2018, 'Efficient hydrogen‐dependent carbon dioxide reduction by Escherichia coli.' Current Biology, vol. 28, no. 1, pp. 140-145.e2. https://doi.org/10.1016/j.cub.2017.11.050

Trunk, K, Peltier, J, Liu, Y-C, Dill, BD, Walker, L, Gow, NAR, Stark, M, Quinn, J, Trost, M & Coulthurst, S 2018, 'The Type VI secretion system deploys anti-fungal effectors against microbial competitors' Nature Microbiology, vol. 3, pp. 920-931. https://doi.org/10.1038/s41564-018-0191-x

Wang, X, He, Z, Luo, H, Zhang, M, Zhang, D, Pan, X & Gadd, GM 2018, 'Multiple-pathway remediation of mercury contamination by a versatile selenite-reducing bacterium' Science of the Total Environment, vol. 615, pp. 615-623. https://doi.org/10.1016/j.scitotenv.2017.09.336

Wang, X, Roger, M, Clément, R, Lecomte, S, Biaso, F, Abriata, LA, Mansuelle, P, Mazurenko, I, Giudici-Orticoni, MT, Lojou, E & Ilbert, M 2018, 'Electron transfer in an acidophilic bacterium: Interaction between a diheme cytochrome and a cupredoxin' Chemical Science, vol. 9, no. 21, pp. 4879-4891. https://doi.org/10.1039/c8sc01615a

Wang, X, Song, W, Qian, H, Zhang, D, Pan, X & Gadd, GM 2018, 'Stabilizing interaction of exopolymers with nano-Se and impact on mercury immobilization in soil and groundwater' Environmental Science: Nano, vol. 5, no. 2, pp. 456-466. https://doi.org/10.1039/c7en00628d

Wang, X, Zhang, D, Qian, H, Liang, Y, Pan, X & Gadd, GM 2018, 'Interactions between biogenic selenium nanoparticles and goethite colloids and consequence for remediation of elemental mercury contaminated groundwater' Science of the Total Environment, vol. 613-614, pp. 672-678. https://doi.org/10.1016/j.scitotenv.2017.09.113

Wufuer, R, Song, W, Zhang, D, Pan, X & Gadd, GM 2018, 'A survey of uranium levels in urine and hair of people living in a coal mining area in Yili, Xinjiang, China' Journal of Environmental Radioactivity, vol. 189, pp. 168-174. https://doi.org/10.1016/j.jenvrad.2018.04.009

Zeden, MS, Schuster, CF, Bowman, L, Zhong, Q, Williams, HD & Gründling, A 2018, 'Cyclic-di-adenosine monophosphate (c-di-AMP) is required for osmotic regulation in Staphylococcus aureus but dispensable for viability in anaerobic conditions ' Journal of Biological Chemistry, vol. 293, no. 9, pp. 3180-3200. https://doi.org/10.1074/jbc.M117.818716

Zhang, Y, Kang, X, Liu, H, Liu, Y, Li, Y, Yu, X, Zhao, K, Gu, Y, Xu, K, Chen, C & Chen, Q 2018, 'Endophytes isolated from ginger rhizome exhibit growth promoting potential for Zea mays' Archives of Agronomy and Soil Science, vol. 64, no. 9, pp. 1302-1314. https://doi.org/10.1080/03650340.2018.1430892

Alder-Rangel A, Bailão AM, da Cunha AF, Soares CMA, Wang C, Bonatto D, Dadachova E, Hakalehto E, Eleutherio ECA, Fernandes ÉKK, Gadd GM, Braus GH, Braga GUL, Goldman GH, Malavazi I, Hallsworth JE, Takemoto JY, Fuller KK, Selbmann L, Corrochano LM, von Zeska Kress MR, Bertolini MC, Schmoll M, Pedrini N, Loera O, Finlay RD, Peralta RM, Rangel DEN. 2018. The second International Symposium on Fungal Stress: ISFUS. Fungal Biology. 122(6):386-399. https://doi.org/10.1016/j.funbio.2017.10.011

Beaton SE, Evans RM, Finney AJ, Lamont CM, Armstrong FA, Sargent F, Carr SB. 2018. The Structure of Hydrogenase-2 from Escherichia coli: Implications for H2 -Driven Proton Pumping. Biochemical Journal. 475(7):1353-1370. https://doi.org/10.1042/BCJ20180053

Ceci A, Pinzari F, Riccardi C, Maggi O, Pierro L, Petrangeli Papini M, Gadd GM, Persiani AM. 2018. Metabolic synergies in the biotransformation of organic and metallic toxic compounds by a saprotrophic soil fungus. Applied Microbiology and Biotechnology. 102(2):1019-1033. https://doi.org/10.1007/s00253-017-8614-9

Ceci A, Pinzari F, Russo F, Persiani AM, Gadd GM. 2018. Roles of saprotrophic fungi in biodegradation or transformation of organic and inorganic pollutants in co-contaminated sites. Applied Microbiology and Biotechnology. https://doi.org/10.1007/s00253-018-9451-1

Dragoš A, Kiesewalter H, Martin M, Hsu CY, Hartmann R, Wechsler T, Eriksen C, Brix S, Drescher K, Stanley-Wall N, Kümmerli R, Kovács ÁT. 2018. Division of Labor during Biofilm Matrix Production. Current Biology. 28(12):1903-1913.e5. https://doi.org/10.1016/j.cub.2018.04.046

Erskine E, Morris RJ, Schor M, Earl C, Gillespie RMC, Bromley KM, Sukhodub T, Clark L, Fyfe P, Serpell LC, Stanley-Wall N, MacPhee CE. 2018. Formation of functional, non-amyloidogenic fibres by recombinant Bacillus subtilis TasA. Molecular Microbiology. https://doi.org/doi.org/10.1111/mmi.13985

Erskine E, MacPhee CE, Stanley-Wall N. 2018. Functional amyloid and other protein fibres in the biofilm matrix. Journal of Molecular Biology. https://doi.org/10.1016/j.jmb.2018.07.026

Gadd G. 2018. Direct and indirect bioleaching of cobalt from low grade laterite and pyrite ores by Aspergillus niger. Microbial Biotechnology.

He Z, Zhang Q, Feng Y, Luo H, Pan X, Gadd GM. 2018. Microbiological and environmental significance of metal-dependent anaerobic oxidation of methane. Science of the Total Environment. 610-611:759-768. https://doi.org/10.1016/j.scitotenv.2017.08.140

Jäger F, Kneuper H, Palmer T. 2018. EssC is a specificity determinant for Staphylococcus aureus type VII secretion. Microbiology. 164:816-820. https://doi.org/10.1099/mic.0.000650

Kalamara M, Špacapan M, Mandic‐Mulec I, Stanley-Wall N. 2018. Social behaviours by Bacillus subtilis: quorum sensing, kin discrimination and beyond. Molecular Microbiology. https://doi.org/10.1111/mmi.14127

Kang X, Csetenyi L, Gadd G. 2018. Biotransformation of lanthanum by Aspergillus niger. Applied Microbiology and Biotechnology. https://doi.org/10.1007/s00253-018-9489-0

Mariano G, Monlezun L, Coulthurst SJ. 2018. Dual Role for DsbA in Attacking and Targeted Bacterial Cells during Type VI Secretion System-Mediated Competition. Cell Reports. 22(3):774-785. https://doi.org/10.1016/j.celrep.2017.12.075

McOwat K, Stanley-Wall NR. 2018. Biofilm Building: A Simple Board Game to Reinforce Knowledge of Biofilm Formation. Journal of Microbiology & Biology Education. 19(1). https://doi.org/10.1128/jmbe.v19i1.1355

Ostrowski A, Cianfanelli FR, Porter M, Mariano G, Peltier J, Wong JJ, Swedlow JR, Trost M, Coulthurst SJ. 2018. Killing with proficiency: integrated post-translational regulation of an offensive Type VI secretion system. PLoS Pathogens. 14(7). https://doi.org/10.1371/journal.ppat.1007230

Owen RA, Fyfe PK, Lodge A, Biboy J, Vollmer W, Hunter WN, Sargent F. 2018. Structure and activity of ChiX, a peptidoglycan hydrolase required for chitinase secretion by Serratia marcescens. Biochemical Journal. 475(2):415-428. https://doi.org/10.1042/BCJ20170633

Petrů M, Wideman J, Moore K, Alcock F, Palmer T, Doležal P. 2018. Evolution of mitochondrial TAT translocases illustrates the loss of bacterial protein transport machines in mitochondria. BMC Biology. 16(1):1-14. https://doi.org/10.1186/s12915-018-0607-3

Rangel DEN, Finlay RD, Hallsworth JE, Dadachova E, Gadd GM. 2018. Fungal strategies for dealing with environment- and agriculture-induced stresses. Fungal Biology. 122(6):602-612. https://doi.org/10.1016/j.funbio.2018.02.002

Roger M, Brown F, Gabrielli W, Sargent F. 2018. Efficient hydrogen‐dependent carbon dioxide reduction by Escherichia coli. Current Biology. 28(1):140-145e2. https://doi.org/10.1016/j.cub.2017.11.050

Trunk K, Peltier J, Liu Y-C, Dill BD, Walker L, Gow NAR, Stark M, Quinn J, Trost M, Coulthurst S. 2018. The Type VI secretion system deploys anti-fungal effectors against microbial competitors. Nature Microbiology. 3:920-931. https://doi.org/10.1038/s41564-018-0191-x

Wang X, Zhang D, Qian H, Liang Y, Pan X, Gadd GM. 2018. Interactions between biogenic selenium nanoparticles and goethite colloids and consequence for remediation of elemental mercury contaminated groundwater. Science of the Total Environment. 613-614:672-678. https://doi.org/10.1016/j.scitotenv.2017.09.113

Wang X, He Z, Luo H, Zhang M, Zhang D, Pan X, Gadd GM. 2018. Multiple-pathway remediation of mercury contamination by a versatile selenite-reducing bacterium. Science of the Total Environment. 615:615-623. https://doi.org/10.1016/j.scitotenv.2017.09.336

Wang X, Song W, Qian H, Zhang D, Pan X, Gadd GM. 2018. Stabilizing interaction of exopolymers with nano-Se and impact on mercury immobilization in soil and groundwater. Environmental Science: Nano. 5(2):456-466. https://doi.org/10.1039/c7en00628d

Wufuer R, Song W, Zhang D, Pan X, Gadd GM. 2018. A survey of uranium levels in urine and hair of people living in a coal mining area in Yili, Xinjiang, China. Journal of Environmental Radioactivity. 189:168-174. https://doi.org/10.1016/j.jenvrad.2018.04.009