University of Dundee

Molecular Microbiology 2015

Alcoforado Diniz, J. and Coulthurst, S. J. (2015) Intraspecies Competition in Serratia marcescens Is Mediated by Type VI-Secreted Rhs Effectors and a Conserved Effector-Associated Accessory Protein. J Bacteriol. 197, 2350-2360
d.o.i: 10.1128/JB.00199-15
PubMed: 4524185
PMC: 25939831

Alcoforado Diniz, J., Liu, Y. C. and Coulthurst, S. J. (2015) Molecular weaponry: diverse effectors delivered by the Type VI secretion system. Cell Microbiol. 17, 1742-1751
d.o.i: 10.1111/cmi.12532
PMC: 26432982

Brandani, G. B., Schor, M., Morris, R., Stanley-Wall, N., MacPhee, C. E., Marenduzzo, D. and Zachariae, U. (2015) The Bacterial Hydrophobin BslA is a Switchable Ellipsoidal Janus Nanocolloid. Langmuir. 31, 11558-11563
d.o.i: 10.1021/acs.langmuir.5b02347
PMC: 26378478

Bromley, K. M., Morris, R. J., Hobley, L., Brandani, G., Gillespie, R. M. C., McCluskey, M., Zachariae, U., Marenduzzo, D., Stanley-Wall, N. R. and MacPhee, C. E. (2015) Interfacial self-assembly of a bacterial hydrophobin. P Natl Acad Sci USA. 112, 5419-5424
d.o.i: 10.1073/pnas.1419016112
PMC: WOS:000353554000054

Browning, D. F., Bavro, V. N., Mason, J. L., Sevastsyanovich, Y. R., Rossiter, A. E., Jeeves, M., Wells, T. J., Knowles, T. J., Cunningham, A. F., Donald, J. W., Palmer, T., Overduin, M. and Henderson, I. R. (2015) Cross-species chimeras reveal BamA POTRA and beta-barrel domains must be fine-tuned for efficient OMP insertion. Mol Microbiol. 97, 646-659
d.o.i: 10.1111/mmi.13052
PMC: 25943387

Cairns, L. S., Martyn, J. E., Bromley, K. and Stanley-Wall, N. R. (2015) An alternate route to phosphorylating DegU of Bacillus subtilis using acetyl phosphate. BMC Microbiol. 15, 78
d.o.i: 10.1186/s12866-015-0410-z
PubMed: 4404196
PMC: 25887289

Caly, D. L., Bellini, D., Walsh, M. A., Dow, J. M. and Ryan, R. P. (2015) Targeting cyclic di-GMP signalling: a strategy to control biofilm formation? Curr Pharm Des. 21, 12-24
PMC: 25189859

Chin, K. H., Liang, J. M., Yang, J. G., Shih, M. S., Tu, Z. L., Wang, Y. C., Sun, X. H., Hu, N. J., Liang, Z. X., Dow, J. M., Ryan, R. P. and Chou, S. H. (2015) Structural Insights into the Distinct Binding Mode of Cyclic Di-AMP with SaCpaA_RCK. Biochemistry. 54, 4936-4951
d.o.i: 10.1021/acs.biochem.5b00633
PMC: 26171638

Cianfanelli, F. R., Monlezun, L. and Coulthurst, S. J. (2015) Aim, Load, Fire: The Type VI Secretion System, a Bacterial Nanoweapon. Trends Microbiol
d.o.i: 10.1016/j.tim.2015.10.005
PMC: 26549582

Cleon, F., Habersetzer, J., Alcock, F., Kneuper, H., Stansfeld, P. J., Basit, H., Wallace, M. I., Berks, B. C. and Palmer, T. (2015) The TatC component of the twin-arginine protein translocase functions as an obligate oligomer. Mol Microbiol. 98, 111-129
d.o.i: 10.1111/mmi.13106
PMC: 26112072

Earl, C. S., An, S. Q. and Ryan, R. P. (2015) The changing face of asthma and its relation with microbes. Trends Microbiol. 23, 408-418
d.o.i: 10.1016/j.tim.2015.03.005
PMC: 25840766

Earl, C. S., Keong, T. W., An, S. Q., Murdoch, S., McCarthy, Y., Garmendia, J., Ward, J., Dow, J. M., Yang, L., O'Toole, G. A. and Ryan, R. P. (2015) Haemophilus influenzae responds to glucocorticoids used in asthma therapy by modulation of biofilm formation and antibiotic resistance. EMBO Mol Med. 7, 1018-1033
d.o.i: 10.15252/emmm.201505088
PubMed: 4551341
PMC: 25995336

Fang, W., Robinson, D. A., Raimi, O. G., Blair, D. E., Harrison, J. R., Lockhart, D. E., Torrie, L. S., Ruda, G. F., Wyatt, P. G., Gilbert, I. H. and van Aalten, D. M. (2015) N-myristoyltransferase is a cell wall target in Aspergillus fumigatus. ACS Chem Biol. 10, 1425-1434
d.o.i: 10.1021/cb5008647
PubMed: 4477619
PMC: 25706802

Gerc, A. J., Diepold, A., Trunk, K., Porter, M., Rickman, C., Armitage, J. P., Stanley-Wall, N. R. and Coulthurst, S. J. (2015) Visualization of the Serratia Type VI Secretion System Reveals Unprovoked Attacks and Dynamic Assembly. Cell Rep. 12, 2131-2142
d.o.i: 10.1016/j.celrep.2015.08.053
PubMed: 4594159
PMC: 26387948

Hobley, L., Harkins, C., MacPhee, C. E. and Stanley-Wall, N. R. (2015) Giving structure to the biofilm matrix: an overview of individual strategies and emerging common themes. FEMS Microbiol Rev. 39, 649-669
d.o.i: 10.1093/femsre/fuv015
PubMed: 4551309
PMC: 25907113

Jank, T., Eckerle, S., Steinemann, M., Trillhaase, C., Schimpl, M., Wiese, S., van Aalten, D. M., Driever, W. and Aktories, K. (2015) Tyrosine glycosylation of Rho by Yersinia toxin impairs blastomere cell behaviour in zebrafish embryos. Nat Commun. 6, 7807
d.o.i: 10.1038/ncomms8807
PubMed: 4518317
PMC: 26190758

Kazlauskaite, A., Martinez-Torres, R. J., Wilkie, S., Kumar, A., Peltier, J., Gonzalez, A., Johnson, C., Zhang, J., Hope, A. G., Peggie, M., Trost, M., van Aalten, D. M., Alessi, D. R., Prescott, A. R., Knebel, A., Walden, H. and Muqit, M. M. (2015) Binding to serine 65-phosphorylated ubiquitin primes Parkin for optimal PINK1-dependent phosphorylation and activation. EMBO Rep. 16, 939-954
d.o.i: 10.15252/embr.201540352
PubMed: 4552487
PMC: 26116755

Kelly, C. L., Pinske, C., Murphy, B. J., Parkin, A., Armstrong, F., Palmer, T. and Sargent, F. (2015) Integration of an [FeFe]-hydrogenase into the anaerobic metabolism of. Biotechnology reports. 8, 94-104
d.o.i: 10.1016/j.btre.2015.10.002
PMC: 26839796

Mariappa, D., Selvan, N., Borodkin, V. S., Alonso, J., Ferenbach, A. T., Shepherd, C., Navratilova, I. H. and van Aalten, D. M. (2015) A mutant O-GlcNAcase as a probe to reveal global dynamics of protein O-GlcNAcylation during Drosophila embryonic development. Biochem J. 470, 255-262
d.o.i: 10.1042/BJ20150610
PMC: 26348912

Mariappa, D., Zheng, X., Schimpl, M., Raimi, O., Ferenbach, A. T., Muller, H. A. and van Aalten, D. M. (2015) Dual functionality of O-GlcNAc transferase is required for Drosophila development. Open Biol. 5
d.o.i: 10.1098/rsob.150234
PMC: 26674417

McDowall, J. S., Hjersing, M. C., Palmer, T. and Sargent, F. (2015) Dissection and engineering of the Escherichia coli formate hydrogenlyase complex. FEBS Lett. 589, 3141-3147
d.o.i: 10.1016/j.febslet.2015.08.043
PMC: 26358294

Ostrowski, A., Gundogdu, M., Ferenbach, A. T., Lebedev, A. A. and van Aalten, D. M. (2015) Evidence for a Functional O-Linked N-Acetylglucosamine (O-GlcNAc) System in the Thermophilic Bacterium Thermobaculum terrenum. J Biol Chem. 290, 30291-30305
d.o.i: 10.1074/jbc.M115.689596
PMC: 26491011

Pathak, S., Alonso, J., Schimpl, M., Rafie, K., Blair, D. E., Borodkin, V. S., Schuttelkopf, A. W., Albarbarawi, O. and van Aalten, D. M. (2015) The active site of O-GlcNAc transferase imposes constraints on substrate sequence. Nat Struct Mol Biol. 22, 744-750
d.o.i: 10.1038/nsmb.3063
PMC: 26237509

Pinske, C., Jaroschinsky, M., Linek, S., Kelly, C. L., Sargent, F. and Sawers, R. G. (2015) Physiology and bioenergetics of [NiFe]-hydrogenase 2-catalyzed H2-consuming and H2-producing reactions in Escherichia coli. J Bacteriol. 197, 296-306
d.o.i: 10.1128/JB.02335-14
PubMed: 4272588
PMC: 25368299

Pinske, C., Sargent, F. and Sawers, R. G. (2015) SlyD-dependent nickel delivery limits maturation of [NiFe]-hydrogenases in late-stationary phase Escherichia coli cells. Metallomics. 7, 683-690
d.o.i: 10.1039/c5mt00019j
PMC: 25620052

Ryan, R. P., An, S. Q., Allan, J. H., McCarthy, Y. and Dow, J. M. (2015) The DSF Family of Cell-Cell Signals: An Expanding Class of Bacterial Virulence Regulators. PLoS Pathog. 11, e1004986
d.o.i: 10.1371/journal.ppat.1004986
PubMed: 4504480
PMC: 26181439

Selvan, N., Mariappa, D., van den Toorn, H. W., Heck, A. J., Ferenbach, A. T. and van Aalten, D. M. (2015) The Early Metazoan Trichoplax adhaerens Possesses a Functional O-GlcNAc System. J Biol Chem. 290, 11969-11982
d.o.i: 10.1074/jbc.M114.628750
PubMed: 4424335
PMC: 25778404

Stanley-Wall, N. R., Coulthurst, S. J. and Holland, I. B. (2015) A Snapshot of the Extraordinary World of Social Microbiology. J Mol Biol. 427, 3625-3627
d.o.i: 10.1016/j.jmb.2015.10.012
PMC: 26518741

Stanley-Wall, N. R. and MacPhee, C. E. (2015) Connecting the dots between bacterial biofilms and ice cream. Physical Biology. 12
d.o.i: Artn 063001
10.1088/1478-3975/12/6/063001
PMC: WOS:000368186300004

van der Beek, S. L., Le Breton, Y., Ferenbach, A. T., Chapman, R. N., van Aalten, D. M., Navratilova, I., Boons, G. J., McIver, K. S., van Sorge, N. M. and Dorfmueller, H. C. (2015) GacA is essential for Group A Streptococcus and defines a new class of monomeric dTDP-4-dehydrorhamnose reductases (RmlD). Mol Microbiol
d.o.i: 10.1111/mmi.13169
PMC: 26278404

Zhang, N., Gordon, S. L., Fritsch, M. J., Esoof, N., Campbell, D. G., Gourlay, R., Velupillai, S., Macartney, T., Peggie, M., van Aalten, D. M., Cousin, M. A. and Alessi, D. R. (2015) Phosphorylation of synaptic vesicle protein 2A at Thr84 by casein kinase 1 family kinases controls the specific retrieval of synaptotagmin-1. J Neurosci. 35, 2492-2507
d.o.i: 10.1523/JNEUROSCI.4248-14.2015
PubMed: 4323530
PMC: 25673844