University of Dundee

2021

Bage MG, Almohammed R, Cowling VH, Pisliakov AV. 2021. A novel RNA Pol II CTD interaction site on the mRNA Capping Enzyme is essential for its allosteric activation. Nucleic Acids Research. 49(6):3109-3126. https://doi.org/10.1093/nar/gkab130

Bartsch A1, Ives C1, Kattner C, Pein F, Diehn M, Tanabe M, Munk A, Zachariae U, Steinem C, Llabres S. 2021. An antibiotic-resistance conferring mutation in a neisserial porin: Structure, ion flux, and ampicillin binding. Biochimica et Biophysica Acta - Biomembranes. 1863(6):Article 183601. https://doi.org/10.1016/j.bbamem.2021.183601

Bredeson JV, Lyon JB, Oniyinde IO, Okereke NR, Kolade O, Nnabue I, Nwadili CO, Hřibová E, Parker M, Nwogha J, Shu S, Carlson J, Kariba R, Muthemba S, Knop K, Barton GJ, Sherwood AV, Lopez-Montes A, Asiedu R, Jamnadass R, Goodstein D, Egesi CN, Featherston J, Simpson G, Doležel J, Hendre PS, Van Deynze A, Kumar PL, Obidiegwu JE, Bhattacharjee R, Rokhsar DS. 2021. Chromosome evolution and the genetic basis of agronomically important traits in greater yam. BioRxiv. 1-36. https://doi.org/10.1101/2021.04.14.439117

Mironenko A, Zachariae U, de Groot BL, Kopec W. 2021. The persistent question of potassium channel permeation mechanisms. Journal of Molecular Biology. Article 167002. https://doi.org/10.1016/j.jmb.2021.167002

Parker MT, Knop K, Barton GJ, Simpson GG. 2021. 2passtools: two-pass alignment using machine-learning-filtered splice junctions increases the accuracy of intron detection in long-read RNA sequencing. Genome Biology. 22(1):Article 72. https://doi.org/10.1186/s13059-021-02296-0

Parker M, Knop K, Zacharaki V, Sherwood A, Tomé D, Yu X, Martin P, Beynon J, Michaels S, Barton GJ, Simpson GG. 2021. Widespread premature transcription termination of Arabidopsis thaliana NLR genes by the spen protein FPA. eLife.

Procter JB, Carstairs GM, Soares B, Mourão K, Ofoegbu TC, Barton D, Lui L, Menard A, Sherstnev N, Roldan-Martinez D, Duce S, Martin DMA, Barton GJ. 2021. Alignment of Biological Sequences with Jalview. Katoh K, editor. In Multiple Sequence Alignment: Methods and Protocols. 1 ed. New York: Humana Press. pp. 203-224. (Methods in Molecular Biology). https://doi.org/10.1007/978-1-0716-1036-7_13

Redl E, Sheibani-Tezerji R, Cardona CDJ, Hamminger P, Timelthaler G, Hassler MR, Zrimšek M, Lagger S, Dillinger T, Hofbauer L, Draganić K, Tiefenbacher A, Kothmayer M, Dietz CH, Ramsahoye BH, Kenner L, Bock C, Seiser C, Ellmeier W, Schweikert G, Egger G. 2021. Requirement of DNMT1 to orchestrate epigenomic reprogramming for NPM-ALK-driven lymphomagenesis. Life Science Alliance. 4(2):Article e202000794. https://doi.org/10.26508/lsa.202000794