From the lab of David M. J. Lilley
Classification of k-turns by RNA type.
16S rRNA | Kt-11 Kt-23 | |
23S rRNA | Kt-7, Kt-15, Kt-38, Kt-42, Kt-46, Kt-58, Kt-78, Kt-4/5, Kt-94/99 | |
riboswitches | SAM riboswitch, Lysine riboswitch, cyclic di-GMP-II riboswitch, T-box riboswitch, G2nA SAM riboswitch | |
snoRNA | box C/D, U65 snoRNA box H/ACA, U3 snoRNA, U8 snoRNA, U14 snoRNA, U25 snoRNA | |
mRNA | L30e pre-mRNA, L10 mRNA, MBP mRNA, Arc1 mRNA, Arc2 mRNA, GlyRα mRNA, caMKIIα mRNA, IFN-γ mRNA |
|
snRNA | U4 snRNA k-turn | |
others | RNase MRP RNA, Human SRP RNA, RNase P RNA, sRkB CRISPR RNA, Mξ DTE2, BC1 DTE2, BC200 RNA |
Links that are not bold are putative k-turns