The following pages include Complementary Information to the manuscript :

The complete VS ribozyme in solution studied by small-angle X-ray scattering.
J. Lipfert, J. Ouellet, D. G. Norman, S. Doniach and D. M. J. Lilley

Structure, 16, 1357-1367, Sept 2008



Click on any picture to see a jmol animation and other infomations.

trans VS
Interactive visualization in Jmol 1
Rendered movies using PyMOL2
cis VS
Junction II-III-VI
Interactive visualization in Jmol 1
Rendered movies using PyMOL2
Junction III-IV-V
Interactive visualization in Jmol 1
Rendered movies using PyMOL2



Overlapping of density maps (Jmol only)



Example of the 1D into 3D data conversion



1 Jmol: an open-source Java viewer for chemical structures in 3D. http://www.jmol.org/
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Windows users must have the Java Virtual Machine installed.
(Most Linux and Mac OSX already have JVM).
Instructions :
Left-click to rotate the molecule
SHIFT + Left-click + drag up to zoom-out
SHIFT + Left-click + drag down to zoom-in
2 Delano W.L. The Pymol Molecular Graphics System. 2002 Delano Scientific, Palo Alto, CA, USA. WWW.

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