University of Dundee

Nucleic Acid Structure Group 2011

Aranda-Orgilles, B., Rutschow, D., Zeller, R., Karagiannidis, A. I., Kohler, A., Chen, C., Wilson, T., Krause, S., Roepcke, S., Lilley, D., Schneider, R. and Schweiger, S. (2011) Protein Phosphatase 2A (PP2A)-specific Ubiquitin Ligase MID1 Is a Sequence-dependent Regulator of Translation Efficiency Controlling 3-Phosphoinositide-dependent Protein Kinase-1 (PDPK-1). The Journal of biological chemistry. 286, 39945-39957
doi. 10.1074/jbc.M111.224451
Pubmed. 21930711

Bowman, A., Ward, R., Wiechens, N., Singh, V., El-Mkami, H., Norman, D. G. and Owen-Hughes, T. (2011) The histone chaperones Nap1 and Vps75 bind histones H3 and H4 in a tetrameric conformation. Mol Cell. 41, 398-408
doi. 10.1016/j.molcel.2011.01.025
Pubmed. 21329878

Daldrop, P., Reyes, F. E., Robinson, D. A., Hammond, C. M., Lilley, D. M., Batey, R. T. and Brenk, R. (2011) Novel ligands for a purine riboswitch discovered by RNA-ligand docking. Chemistry & biology. 18, 324-335
doi. 10.1016/j.chembiol.2010.12.020
Pubmed. 21439477

Freeman, A. D., Ward, R., El Mkami, H., Lilley, D. M. and Norman, D. G. (2011) Analysis of Conformational Changes in the DNA Junction-Resolving Enzyme T7 Endonuclease I on Binding a Four-Way Junction Using EPR. Biochemistry
doi. 10.1021/bi2011898
Pubmed. 22008089

Freeman, A. D., Ward, R., El Mkami, H., Lilley, D. M. and Norman, D. G. (2011) Analysis of Conformational Changes in the DNA Junction-Resolving Enzyme T7 Endonuclease I on Binding a Four-Way Junction Using EPR. Biochemistry
doi. 10.1021/bi2011898
Pubmed. 22008089

Harusawa, K., Nishiura, L., Usami, Z., Zhao, Z.-y. and Lilley, D. M. J. (2011) Synthesis of novel imidazole C1 and C3-ribonucleoside phosphoramidites for probing catalytic mechanism in ribozyme. Heterocycles. 83, 2041-2055

Li, N. S., Frederiksen, J. K., Koo, S. C., Lu, J., Wilson, T. J., Lilley, D. M. and Piccirilli, J. A. (2011) A general and efficient approach for the construction of RNA oligonucleotides containing a 5'-phosphorothiolate linkage. Nucleic acids research. 39, e31
doi. 10.1093/nar/gkq1265
Pubmed. 21148150

Lilley, D. M. (2011) Mechanisms of RNA catalysis. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 366, 2910-2917
doi. 10.1098/rstb.2011.0132
Pubmed. 21930582

Lilley, D. M. (2011) Catalysis by the nucleolytic ribozymes. Biochemical Society transactions. 39, 641-646
doi. 10.1042/BST0390641
Pubmed. 21428954

Lilley, D. M. and Sutherland, J. (2011) The chemical origins of life and its early evolution: an introduction. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 366, 2853-2856
doi. 10.1098/rstb.2011.0133
Pubmed. 21930575

Ouellet, J., Schorr, S., Iqbal, A., Wilson, T. J. and Lilley, D. M. (2011) Orientation of cyanine fluorophores terminally attached to DNA via long, flexible tethers. Biophysical journal. 101, 1148-1154
doi. 10.1016/j.bpj.2011.07.007
Pubmed. 21889452

Schroeder, K. T., Daldrop, P. and Lilley, D. M. (2011) RNA tertiary interactions in a riboswitch stabilize the structure of a kink turn. Structure. 19, 1233-1240
doi. 10.1016/j.str.2011.07.003
Pubmed. 21893284

Wilson, T. J. and Lilley, D. M. (2011) Do the hairpin and VS ribozymes share a common catalytic mechanism based on general acid-base catalysis? A critical assessment of available experimental data. RNA. 17, 213-221
doi. 10.1261/rna.2473711
Pubmed. 21173201