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RING Motif

Motif Criteria Details:

1.RING-H2: C-X(2)-C-X(9,39)-C-X(1,3)-H-X(2,3)-H-X(2)-C-X(4,48)-C-X(2)-C
2.RING-HC: C-X(2)-C-X(9,39)-C-X(1,3)-H-X(2,3)-C-X(2)-C-X(4,48)C-X(2)-C
3.RING-HCa:C-X-[I/V]-C-X(10,28)-C-X(1,2)-G-H-X(1,2)-F-C-X(2)-C-X(3)-W-X(6,30)-C-P-X-C
4.RING-HCb:C-X-[I/V]-C-X(13,24)-C-X(1,2)-G-H-X(1,2)-F-C-X(2)-C-X(7,22)-C-P-X(2,8)-C
5.RING-C2: C-X(2)-C-X(13)-C-X-C-X(4)-C-X(2)-C-X(11,16)-C-X(2)-C
6.RING-v: C-X(2)-C-X(10,45)-C-X-C-X(7)-H-X(2)-C-X(11,24)-C-X(2)-C
7.RING-D: C-X-[I/V]-C-[L/E/E/F]-X(2)-G-X(5)-[L/P]-C-G-H-X-F-D-X(2)-C-X(3)-[W/F]-X(4)-H-X-C-[P/L]-C
8.RING-S/T:C-X-V-[C/S]-X(14,15)-C-G-H-X-F-[H/C]-X(2,3)-[S/T]-X(2,3)-W-X(7,11)-C-X(2)-C
9.RING-G: C-X(2)-C-X(1,88)-C-X-H-X(2)-G-X(2)-C-X(13)-C-X(2)-C

Find different RING Motifs


Protein Sequences:
(Fasta format only)

 

 

These motifs are published by Sophia L. Stone These motifs are adjusted to include all the known proteins against that motif. Also the script only searches for non overlapping patterns due to inbuilt functional constraint.

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