Publications

• Swedlow JR, Goldberg IG, Eliceiri KW; the OME Consortium. (2009) Bioimage Informatics for Experimental Biology. Annu Rev Biophys. Jun 9;38:327-346 Full Text.
• Macaulay C, Sloan D, Forbes P, Jiang X, Loynton S, Swedlow JR, Gregor. (2008) Usable Image: Integrating Usability and User Centred Design into Scientific Software Development. IEEE Software. vol. 26 no. 1 pp. 96-102 Abstract.
• Khoudoli GA, Gillespie PJ, Stewart G, Andersen JS, Swedlow JR, Blow JJ. (2008) Temporal profiling of the chromatin proteome reveals system-wide responses to replication inhibition. Curr. Biol. 18:838-43. Full Text (free).
• Moore J, Allan C, Burel JM, Loranger B, MacDonald D, Monk J, Swedlow JR. (2007) Open tools for storage and management of quantitative image data. Methods Cell Biol. 85:555-70. Full Text.
• Porter IM, McClelland S, Khoudoli GA, Hunter C, Andersen J, McAinsh AD, Blow JJ, Swedlow JR. (2007) Bod1, a Novel Kinetochore Protein Required for Chromosome Biorientation. J Cell Biol. 179(2):187-97. Full Text (free).
• Murray JM, Appleton P, Swedlow JR, Waters JC. (2007) Evaluating performance in fluorescence 3-D microscopy. J Microsc. 229:390-405. Full Text (free).
• Gillespie P.J, Khoudoli GA, Stewart, G, Swedlow JR, Blow JJ. (2007) ELYS/MEL-28 Chromatin Association Coordinates Nuclear Pore Complex Assembly and the Replication Licensing System. Curr. Biol. 17:1657-1662. Full Text (free).
• Wheatley SP, Andrews, PD, Medema RH, Swedlow JR, Lens SMA. (2007) Phosphorylation of Survivin by Aurora-B Kinase Reduces its Affinity for Centromeres and Negatively Regulates Survivin Function at These Sites. Cell Cycle. 6:1220-1230. Full Text (free).
• Wilcock AC, Swedlow JR, Storey KG. (2007) Mitotic spindle orientation distinguishes stem cell and terminal modes of neuron production in the early spinal cord. Development 134:1943-1954. Full Text (free).
• Swedlow JR, Lewis SE, Goldberg IG. (2006) Data Models Across Labs, Genomes, Space, and Time. Nature Cell Biol. 8:1190-1194.
• Ilya G Goldberg, Chris Allan, Jean-Marie Burel, Doug Creager, Andrea Falconi, Harry Hochheiser, Josiah Johnston, Jeff Mellen, Peter K Sorger and Jason R Swedlow. The Open Microscopy Environment (OME) Data Model and XML file: open tools for informatics and quantitative analysis in biological imaging. (2005) Genome Biology, 6:R47 Full text (free)
• Guennadi A Khoudoli, Iain M Porter, J Julian Blow and Jason R Swedlow. Optimisation of the two-dimensional gel electrophoresis protocol using the Taguchi approach. (2004) Proteome Science 2:6.
• Andrews PD, Ovechkina Y, Morrice N, Wagenbach M, Duncan K, Wordeman L, Swedlow JR. Aurora B regulates MCAK at the mitotic centromere. (2004) Dev Cell 6:253-268. PubMed
• Swedlow JR. (2003) Quantitative fluorescence microscopy and image deconvolution. Methods Cell Biol 72:346-367. PubMed
• Andrews PD, Knatko E, Moore WJ, Swedlow JR. Mitotic mechanics: the auroras come into view. (2003) Curr Opin Cell Biol. 15(6): 672-83. PubMed
• Maiato H, Rieder CL, Swedlow JR, Cole R, Sunkel CE, Earnshaw WC. Human CLASP1 is an outer kinetochore component that regulates spindle microtubule dynamics. (2003) Cell. 2003: 113(7):891-904. PubMed
• Swedlow JR, Goldberg I, Brauner E, Sorger PK. Image informatics and quantitative analysis of biological images. (2003) Science 300:100-102. PubMed
• Swedlow JR, Hirano T. The making of the mitotic chromosome: Modern insights into classical questions. (2003) Mol. Cell. 11:557-569. PubMed
• Trinkle-Mulcahy L, Andrews PD, Wickramasinghe S, Sleeman J, Prescott AR, Lam YW, Lyon CE, Swedlow JR, Lamond AI. Time-lapse imaging reveals dynamic relocalization of PP1g throughout the mammalian cell cycle. (2003) Mol. Biol Cell. 14:107-117. PubMed
• Swedlow JR, Platani M. (2002) Live Cell Imaging Using Wide-Field Microscopy and Deconvolution. Cell Struct. Funct. 27: 335-341. PubMed
• Carmo-Fonseca M, Platani M, Swedlow JR. Macromolecular mobility inside the cell nucleus. (2002) Trends Cell Biol. 12:491-495. PubMed
• Platani M, Goldberg I, Lamond AI, Swedlow JR. (2002) Cajal body dynamics and association with chromatin are ATP-dependent. Nature Cell Biol. 4:502-8. PubMed PDF
• Swedlow JR, Hu K, Andrews PD, Roos DS, Murray JM. Measuring tubulin content in Toxoplasma gondii: a comparison of laser-scanning confocal and wide-field fluorescence microscopy. (2002) Proc. Soc. Natl. Acad. Sci. 99: 2014-2019. PubMed
• Andrews PD, Harper IS, Swedlow JR. To 5D and Beyond: Quantitative Fluorescence Microscopy in the Postgenomic Era. (2002) Traffic 3:29-36. PubMed
• Wallace W, Schaefer LH, Swedlow JR. (2001) A working person's guide to deconvolution in light microscopy. Biotechniques 31:1076-1097. PubMed
• Hill E, Olusanya O, Van Der Kaay J, Downes CP, Andrews PD, Swedlow JR, Smythe E (2001) Regulation of clathrin-coated vesicle formation. Biochem Soc Trans 29:375-377. PubMed
• Murnion ME, Adams RA, Callister DM, Allis CD, Earnshaw WC, Swedlow JR. (2001) Chromatin-associated protein phosphatase 1 regulates aurora-B and histone H3 phosphorylation. J. Biol. Chem. 276:26656-26665. PubMed
• Olusanya O, Andrews PA, Swedlow JR, Smythe E. (2001) Phosphorylation of threonine 156 of the u2 subunit of AP2 is essential for endocytosis in vitro and in vivo. Curr. Biol. 11:896-900. PubMed
• Kaplan KB, Burds AA, SwedlowJR, Bekir SS, Sorger PK, Näthke IS. (2001) A role for the Adenomatous polyposis coli protein in chromosome segregation. Nature Cell Biol. 3:429-432. PubMed
• Swedlow JR, Lamond AI. (2001) Nuclear Dynamics: Where genes are and how they got there. Genome Biol. 2:2.1-2.7. PubMed
• Platani M, Goldberg I, Swedlow JR, Lamond AI. (2000) In vivo analysis of Cajal body movement, separation and joining in live human cells. J. Cell Biol. 151:1561-1574. PubMed
• Platani M, Goldberg I, Swedlow JR, Lamond AI. (2000) In vivo analysis of Cajal body movement, separation and joining in live human cells. J. Cell Biol. 151:1561-1574. PubMed
• Swedlow JR. (1999) Chromosome assembly in vitro using Xenopus egg extracts. Chromosome Analysis. W. Bickmore, ed. Oxford University Press: Oxford. pp. 165-182.